IL_8P2K_212

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAACAA(OMU)G*C(PSU)A(PSU)C

Length

13 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|G|2674
8P2K|1|B5|A|2675
8P2K|1|B5|A|2676
8P2K|1|B5|C|2677
8P2K|1|B5|A|2678
8P2K|1|B5|A|2679
8P2K|1|B5|OMU|2680
8P2K|1|B5|G|2681
*
8P2K|1|B5|C|3582
8P2K|1|B5|PSU|3583
8P2K|1|B5|A|3584
8P2K|1|B5|PSU|3585
8P2K|1|B5|C|3586

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Ribosomal protein L3

Chain BP

uL22

Chain Bd

60S ribosomal protein L31