IL_8P2K_218

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GG*CGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P2K_218 not in the Motif Atlas

Homologous match to IL_8C3A_086

Geometric discrepancy: 0.2936

The information below is about IL_8C3A_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74125.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

8P2K|1|B5|G|2739
8P2K|1|B5|G|2740
*
8P2K|1|B5|C|3334
8P2K|1|B5|G|3335
8P2K|1|B5|A|3336
8P2K|1|B5|C|3337

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

Ribosomal protein L19