IL_8P2K_322

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGACAGGA(OMU)UG*CUCGAUUCC

Length

20 nucleotides

Bulged bases

8P2K|1|A2|G|1286, 8P2K|1|A2|U|1315

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|A2|G|1281
8P2K|1|A2|G|1282
8P2K|1|A2|A|1283
8P2K|1|A2|C|1284
8P2K|1|A2|A|1285
8P2K|1|A2|G|1286
8P2K|1|A2|G|1287
8P2K|1|A2|A|1288
8P2K|1|A2|OMU|1289
8P2K|1|A2|U|1290
8P2K|1|A2|G|1291
*
8P2K|1|A2|C|1310
8P2K|1|A2|U|1311
8P2K|1|A2|C|1312
8P2K|1|A2|G|1313
8P2K|1|A2|A|1314
8P2K|1|A2|U|1315
8P2K|1|A2|U|1316
8P2K|1|A2|C|1317
8P2K|1|A2|C|1318

Current chains

Chain A2

18s rRNA

Nearby chains

Chain AC

Ribosomal protein S27a

Chain AG

40S ribosomal protein S29

Chain Aj

S10_plectin domain-containing protein

Chain Al

40S ribosomal protein S12