IL_8P2K_352
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAAGUCGG*CUGU(OMC)
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_352 not in the Motif Atlas
- Homologous match to IL_8C3A_484
- Geometric discrepancy: 0.0753
- The information below is about IL_8C3A_484
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.2
- Basepair signature
- cWW-cWW-L-cWW-L-R-L-R-L-L
- Number of instances in this motif group
- 3
Unit IDs
8P2K|1|B5|G|2690
8P2K|1|B5|G|2691
8P2K|1|B5|A|2692
8P2K|1|B5|A|2693
8P2K|1|B5|G|2694
8P2K|1|B5|U|2695
8P2K|1|B5|C|2696
8P2K|1|B5|G|2697
8P2K|1|B5|G|2698
*
8P2K|1|B5|C|3569
8P2K|1|B5|U|3570
8P2K|1|B5|G|3571
8P2K|1|B5|U|3572
8P2K|1|B5|OMC|3573
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BB
- Ribosomal protein L3
- Chain BV
- Ribosomal protein L23
Coloring options: