IL_8P2K_356

3D structure

PDB id

8P2K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of translating ribosome, NAC and METAP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUGAGAGGUGUAGAAUAA*UACUCUUAU

Length

27 nucleotides

Bulged bases

8P2K|1|B5|U|3689, 8P2K|1|B5|U|3696

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8P2K|1|B5|A|3681
8P2K|1|B5|U|3682
8P2K|1|B5|G|3683
8P2K|1|B5|A|3684
8P2K|1|B5|G|3685
8P2K|1|B5|A|3686
8P2K|1|B5|G|3687
8P2K|1|B5|G|3688
8P2K|1|B5|U|3689
8P2K|1|B5|G|3690
8P2K|1|B5|U|3691
8P2K|1|B5|A|3692
8P2K|1|B5|G|3693
8P2K|1|B5|A|3694
8P2K|1|B5|A|3695
8P2K|1|B5|U|3696
8P2K|1|B5|A|3697
8P2K|1|B5|A|3698
*
8P2K|1|B5|U|3783
8P2K|1|B5|A|3784
8P2K|1|B5|C|3785
8P2K|1|B5|U|3786
8P2K|1|B5|C|3787
8P2K|1|B5|U|3788
8P2K|1|B5|U|3789
8P2K|1|B5|A|3790
8P2K|1|B5|U|3791

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Aa

40S ribosomal protein S3a

Chain Bi

60S ribosomal protein L36

Chain Bv

Ribosomal protein uL1