IL_8P2K_373
3D structure
- PDB id
- 8P2K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and METAP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- (OMU)GAAC*GAA
- Length
- 8 nucleotides
- Bulged bases
- 8P2K|1|B5|A|2260, 8P2K|1|B5|A|2271
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P2K_373 not in the Motif Atlas
- Homologous match to IL_8P9A_290
- Geometric discrepancy: 0.412
- The information below is about IL_8P9A_290
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
8P2K|1|B5|OMU|2258
8P2K|1|B5|G|2259
8P2K|1|B5|A|2260
8P2K|1|B5|A|2261
8P2K|1|B5|C|2262
*
8P2K|1|B5|G|2270
8P2K|1|B5|A|2271
8P2K|1|B5|A|2272
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BK
- Glucose-6-phosphate isomerase
- Chain BP
- uL22
- Chain BR
- Ribosomal protein L19
- Chain Bl
- 60S ribosomal protein L39-like
- Chain Na
- Nascent polypeptide-associated complex subunit alpha
- Chain Nb
- Transcription factor BTF3
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