IL_8P85_002
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUC*GU
- Length
- 5 nucleotides
- Bulged bases
- 8P85|1|1|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P85_002 not in the Motif Atlas
- Geometric match to IL_8P9A_232
- Geometric discrepancy: 0.0794
- The information below is about IL_8P9A_232
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
8P85|1|1|A|13
8P85|1|1|U|14
8P85|1|1|C|15
*
8P85|1|4|G|144
8P85|1|4|U|145
Current chains
- Chain 1
- 25S ribosomal RNA
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain 8
- 60S ribosomal protein L25
- Chain p
- 60S ribosomal protein L8-A
- Chain v
- 60S ribosomal protein L15-A
Coloring options: