3D structure

PDB id
8P85 (explore in PDB, NAKB, or RNA 3D Hub)
Description
80S yeast ribosome in complex with Fluorolissoclimide
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
ACGUUU*AUCGU
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8P85|1|A|A|817
8P85|1|A|C|818
8P85|1|A|G|819
8P85|1|A|U|820
8P85|1|A|U|821
8P85|1|A|U|822
*
8P85|1|A|A|850
8P85|1|A|U|851
8P85|1|A|C|852
8P85|1|A|G|853
8P85|1|A|U|854

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain I
40S ribosomal protein S7-A
Chain z
60S ribosomal protein L19-A

Coloring options:

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