IL_8P85_196
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 8P85|1|A|C|1158, 8P85|1|A|C|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P85_196 not in the Motif Atlas
- Geometric match to IL_8CRE_445
- Geometric discrepancy: 0.1653
- The information below is about IL_8CRE_445
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
8P85|1|A|A|1157
8P85|1|A|C|1158
8P85|1|A|C|1159
8P85|1|A|A|1160
*
8P85|1|A|U|1617
8P85|1|A|C|1618
8P85|1|A|C|1619
8P85|1|A|C|1620
8P85|1|A|U|1621
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain G
- 40S ribosomal protein S5
- Chain R
- 40S ribosomal protein S16-A
- Chain d
- 40S ribosomal protein S28-A
Coloring options: