IL_8P85_284

3D structure

PDB id

8P85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Fluorolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

8P85|1|AR|A|1263

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8P85_284 not in the Motif Atlas

Geometric match to IL_8P9A_284

Geometric discrepancy: 0.0233

The information below is about IL_8P9A_284

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.2

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

24

Unit IDs

8P85|1|AR|G|1262
8P85|1|AR|A|1263
8P85|1|AR|G|1264
8P85|1|AR|U|1265
8P85|1|AR|G|1266
*
8P85|1|AR|C|1275
8P85|1|AR|U|1276
8P85|1|AR|C|1277

Current chains

Chain AR

25S ribosomal RNA

Nearby chains