IL_8P85_446
3D structure
- PDB id
- 8P85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Fluorolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AAUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- 8P85|1|sR|A|1346, 8P85|1|sR|U|1347
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8P85_446 not in the Motif Atlas
- Geometric match to IL_8P9A_445
- Geometric discrepancy: 0.0274
- The information below is about IL_8P9A_445
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78800.2
- Basepair signature
- cWW-cSH-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8P85|1|sR|A|1345
8P85|1|sR|A|1346
8P85|1|sR|U|1347
8P85|1|sR|A|1348
*
8P85|1|sR|U|1377
8P85|1|sR|U|1378
8P85|1|sR|C|1379
8P85|1|sR|U|1380
Current chains
- Chain sR
- 16S ribosomal RNA
Nearby chains
- Chain Rb
- Guanine nucleotide-binding protein subunit beta-like protein
- Chain c6
- 40S ribosomal protein S16-A
- Chain d0
- Small ribosomal subunit protein uS10
- Chain s3
- Small ribosomal subunit protein uS3
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