IL_8PEG_190

3D structure

PDB id

8PEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC

Length

35 nucleotides

Bulged bases

8PEG|1|7|U|2131, 8PEG|1|7|U|2132, 8PEG|1|7|G|2133, 8PEG|1|7|C|2164, 8PEG|1|7|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PEG|1|7|G|2124
8PEG|1|7|G|2125
8PEG|1|7|A|2126
8PEG|1|7|G|2127
8PEG|1|7|G|2128
8PEG|1|7|C|2129
8PEG|1|7|U|2130
8PEG|1|7|U|2131
8PEG|1|7|U|2132
8PEG|1|7|G|2133
8PEG|1|7|A|2134
8PEG|1|7|A|2135
8PEG|1|7|G|2136
8PEG|1|7|U|2137
*
8PEG|1|7|A|2154
8PEG|1|7|U|2155
8PEG|1|7|G|2156
8PEG|1|7|G|2157
8PEG|1|7|A|2158
8PEG|1|7|G|2159
8PEG|1|7|C|2160
8PEG|1|7|C|2161
8PEG|1|7|G|2162
8PEG|1|7|A|2163
8PEG|1|7|C|2164
8PEG|1|7|C|2165
8PEG|1|7|U|2166
8PEG|1|7|U|2167
8PEG|1|7|G|2168
8PEG|1|7|A|2169
8PEG|1|7|A|2170
8PEG|1|7|A|2171
8PEG|1|7|U|2172
8PEG|1|7|A|2173
8PEG|1|7|C|2174

Current chains

Chain 7

23S ribosomal RNA

Nearby chains

Chain X

Transfer RNA; tRNA

Chain a

Large ribosomal subunit protein uL1