IL_8PFR_037
3D structure
- PDB id
- 8PFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse RPL39L integrated into the yeast 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- CGUAUC*GAAG
- Length
- 10 nucleotides
- Bulged bases
- 8PFR|1|A|A|1103
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PFR_037 not in the Motif Atlas
- Homologous match to IL_8C3A_039
- Geometric discrepancy: 0.2657
- The information below is about IL_8C3A_039
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_59027.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 1
Unit IDs
8PFR|1|A|C|977
8PFR|1|A|G|978
8PFR|1|A|U|979
8PFR|1|A|A|980
8PFR|1|A|U|981
8PFR|1|A|C|982
*
8PFR|1|A|G|1101
8PFR|1|A|A|1102
8PFR|1|A|A|1103
8PFR|1|A|G|1104
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LK
- 60S ribosomal protein L7-A
- Chain QP
- 60S ribosomal protein L18-A
- Chain RB
- 60S ribosomal protein L29
Coloring options: