IL_8PHJ_045
3D structure
- PDB id
- 8PHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cA4-bound Cami1 in complex with 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.67 Å
Loop
- Sequence
- GCUGCAU*AUG(2MG)C
- Length
- 12 nucleotides
- Bulged bases
- 8PHJ|1|A|C|1054
- QA status
- Modified nucleotides: 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PHJ_045 not in the Motif Atlas
- Homologous match to IL_5J7L_047
- Geometric discrepancy: 0.181
- The information below is about IL_5J7L_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PHJ|1|A|G|1050
8PHJ|1|A|C|1051
8PHJ|1|A|U|1052
8PHJ|1|A|G|1053
8PHJ|1|A|C|1054
8PHJ|1|A|A|1055
8PHJ|1|A|U|1056
*
8PHJ|1|A|A|1204
8PHJ|1|A|U|1205
8PHJ|1|A|G|1206
8PHJ|1|A|2MG|1207
8PHJ|1|A|C|1208
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
- Chain X
- CRISPR-associated protein, APE2256 family
Coloring options: