IL_8PHJ_071

3D structure

PDB id

8PHJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

cA4-bound Cami1 in complex with 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

CAG*CGAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8PHJ_071 not in the Motif Atlas

Homologous match to IL_5J7L_252

Geometric discrepancy: 0.1171

The information below is about IL_5J7L_252

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47972.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

8PHJ|1|a|C|269
8PHJ|1|a|A|270
8PHJ|1|a|G|271
*
8PHJ|1|a|C|366
8PHJ|1|a|G|367
8PHJ|1|a|A|368
8PHJ|1|a|U|369
8PHJ|1|a|G|370

Current chains

Chain a

23S rRNA (2862-MER)

Nearby chains