IL_8PJ3_015
3D structure
- PDB id
- 8PJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human 48S translation initiation complex upon transfer of initiator tRNA to eIF5B (48S-3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUGU*AG(A2M)G
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PJ3_015 not in the Motif Atlas
- Homologous match to IL_8C3A_403
- Geometric discrepancy: 0.1217
- The information below is about IL_8C3A_403
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86374.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
8PJ3|1|A|C|151
8PJ3|1|A|U|152
8PJ3|1|A|G|153
8PJ3|1|A|U|154
*
8PJ3|1|A|A|164
8PJ3|1|A|G|165
8PJ3|1|A|A2M|166
8PJ3|1|A|G|167
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain S
- 40S ribosomal protein S6
- Chain T
- 40S ribosomal protein S24
Coloring options: