IL_8PJ4_015

3D structure

PDB id

8PJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex after eIF5 release (48S-4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGGAUAAC*GCUAAUA(OMC)A

Length

17 nucleotides

Bulged bases

8PJ4|1|A|U|172

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ4|1|A|U|144
8PJ4|1|A|G|145
8PJ4|1|A|G|146
8PJ4|1|A|A|147
8PJ4|1|A|U|148
8PJ4|1|A|A|149
8PJ4|1|A|A|150
8PJ4|1|A|C|151
*
8PJ4|1|A|G|167
8PJ4|1|A|C|168
8PJ4|1|A|U|169
8PJ4|1|A|A|170
8PJ4|1|A|A|171
8PJ4|1|A|U|172
8PJ4|1|A|A|173
8PJ4|1|A|OMC|174
8PJ4|1|A|A|175

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6

Chain T

40S ribosomal protein S24