IL_8PJ4_050

3D structure

PDB id

8PJ4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex after eIF5 release (48S-4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUCU*GGAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ4|1|A|G|881
8PJ4|1|A|U|882
8PJ4|1|A|U|883
8PJ4|1|A|C|884
8PJ4|1|A|U|885
*
8PJ4|1|A|G|901
8PJ4|1|A|G|902
8PJ4|1|A|A|903
8PJ4|1|A|A|904
8PJ4|1|A|C|905

Current chains

Chain A

18S rRNA

Nearby chains

Chain B

40S ribosomal protein S11