IL_8PJ5_014

3D structure

PDB id

8PJ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCUACUU*AUGCCGAC

Length

15 nucleotides

Bulged bases

8PJ5|1|A|C|139, 8PJ5|1|A|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ5|1|A|G|130
8PJ5|1|A|C|139
8PJ5|1|A|U|140
8PJ5|1|A|A|141
8PJ5|1|A|C|142
8PJ5|1|A|U|143
8PJ5|1|A|U|144
*
8PJ5|1|A|A|175
8PJ5|1|A|U|176
8PJ5|1|A|G|177
8PJ5|1|A|C|178
8PJ5|1|A|C|179
8PJ5|1|A|G|180
8PJ5|1|A|A|181
8PJ5|1|A|C|182

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6