IL_8PJ5_050

3D structure

PDB id

8PJ5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 48S translation initiation complex after eIF2 release prior 60S subunit joining (48S-5)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUCU*GGAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PJ5|1|A|G|881
8PJ5|1|A|U|882
8PJ5|1|A|U|883
8PJ5|1|A|C|884
8PJ5|1|A|U|885
*
8PJ5|1|A|G|901
8PJ5|1|A|G|902
8PJ5|1|A|A|903
8PJ5|1|A|A|904
8PJ5|1|A|C|905

Current chains

Chain A

18S rRNA

Nearby chains

Chain B

40S ribosomal protein S11