3D structure

PDB id
8PK0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
Experimental method
ELECTRON MICROSCOPY
Resolution
3.03 Å

Loop

Sequence
GCAAAUCUUAC*GUUCAGC
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8PK0|1|A|G|2478
8PK0|1|A|C|2479
8PK0|1|A|A|2480
8PK0|1|A|A|2481
8PK0|1|A|A|2482
8PK0|1|A|U|2483
8PK0|1|A|C|2484
8PK0|1|A|U|2485
8PK0|1|A|U|2486
8PK0|1|A|A|2487
8PK0|1|A|C|2488
*
8PK0|1|A|G|2678
8PK0|1|A|U|2679
8PK0|1|A|U|2680
8PK0|1|A|C|2681
8PK0|1|A|A|2682
8PK0|1|A|G|2683
8PK0|1|A|C|2684

Current chains

Chain A
16S rRNA + pre-H68-71 segment

Nearby chains

Chain E
39S ribosomal protein L3, mitochondrial
Chain L
39S ribosomal protein L14, mitochondrial
Chain Q
39S ribosomal protein L19, mitochondrial
Chain z
Mitochondrial ribosome-associated GTPase 1

Coloring options:

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