IL_8PK0_034
3D structure
- PDB id
- 8PK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- UCUAG*CAACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PK0_034 not in the Motif Atlas
- Homologous match to IL_5J7L_338
- Geometric discrepancy: 0.3584
- The information below is about IL_5J7L_338
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
8PK0|1|A|U|2984
8PK0|1|A|C|2985
8PK0|1|A|U|2986
8PK0|1|A|A|2987
8PK0|1|A|G|2988
*
8PK0|1|A|C|2998
8PK0|1|A|A|2999
8PK0|1|A|A|3000
8PK0|1|A|C|3001
8PK0|1|A|A|3002
Current chains
- Chain A
- 16S rRNA + pre-H68-71 segment
Nearby chains
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain t
- GTP-binding protein 10
Coloring options: