IL_8PK0_049

3D structure

PDB id

8PK0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

AUCUACAAUCAACCAAC*GUCAUU

Length

23 nucleotides

Bulged bases

8PK0|1|A|C|2393, 8PK0|1|A|U|2404, 8PK0|1|A|C|2405, 8PK0|1|A|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PK0|1|A|A|2384
8PK0|1|A|U|2385
8PK0|1|A|C|2386
8PK0|1|A|U|2387
8PK0|1|A|A|2388
8PK0|1|A|C|2389
8PK0|1|A|A|2390
8PK0|1|A|A|2391
8PK0|1|A|U|2392
8PK0|1|A|C|2393
8PK0|1|A|A|2394
8PK0|1|A|A|2395
8PK0|1|A|C|2396
8PK0|1|A|C|2397
8PK0|1|A|A|2398
8PK0|1|A|A|2399
8PK0|1|A|C|2400
*
8PK0|1|A|G|2403
8PK0|1|A|U|2404
8PK0|1|A|C|2405
8PK0|1|A|A|2406
8PK0|1|A|U|2407
8PK0|1|A|U|2408

Current chains

Chain A

16S rRNA + pre-H68-71 segment

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain D

39S ribosomal protein L2, mitochondrial