IL_8PK0_053

3D structure

PDB id

8PK0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7

Experimental method

ELECTRON MICROSCOPY

Resolution

3.03 Å

Loop

Sequence

CCG*CAGG

Length

7 nucleotides

Bulged bases

8PK0|1|A|A|3120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8PK0_053 not in the Motif Atlas

Homologous match to IL_7A0S_092

Geometric discrepancy: 0.4982

The information below is about IL_7A0S_092

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10892.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

39

Unit IDs

8PK0|1|A|C|3108
8PK0|1|A|C|3109
8PK0|1|A|G|3110
*
8PK0|1|A|C|3119
8PK0|1|A|A|3120
8PK0|1|A|G|3121
8PK0|1|A|G|3122

Current chains

Chain A

16S rRNA + pre-H68-71 segment

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial

Chain z

Mitochondrial ribosome-associated GTPase 1