IL_8PNN_024
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGAUG*CGGAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PNN_024 not in the Motif Atlas
- Homologous match to IL_8P9A_254
- Geometric discrepancy: 0.1156
- The information below is about IL_8P9A_254
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85536.2
- Basepair signature
- cWW-tSH-L-R-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
8PNN|1|1|C|758
8PNN|1|1|U|759
8PNN|1|1|G|760
8PNN|1|1|A|761
8PNN|1|1|U|762
8PNN|1|1|G|763
*
8PNN|1|1|C|768
8PNN|1|1|G|769
8PNN|1|1|G|770
8PNN|1|1|A|771
8PNN|1|1|U|772
8PNN|1|1|G|773
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AB
- 60S ribosomal protein L28
- Chain AP
- 60S ribosomal protein L42-A
- Chain t
- 60S ribosomal protein L13-A
Coloring options: