IL_8PNN_054

3D structure

PDB id

8PNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Bromolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GACGGUGGC*GAAUCCGCUAAGGAGUGUGUAACAACUCAC

Length

39 nucleotides

Bulged bases

8PNN|1|1|G|1236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PNN|1|1|G|1230
8PNN|1|1|A|1231
8PNN|1|1|C|1232
8PNN|1|1|G|1233
8PNN|1|1|G|1234
8PNN|1|1|U|1235
8PNN|1|1|G|1236
8PNN|1|1|G|1237
8PNN|1|1|C|1238
*
8PNN|1|1|G|1250
8PNN|1|1|A|1251
8PNN|1|1|A|1252
8PNN|1|1|U|1253
8PNN|1|1|C|1254
8PNN|1|1|C|1255
8PNN|1|1|G|1256
8PNN|1|1|C|1257
8PNN|1|1|U|1258
8PNN|1|1|A|1259
8PNN|1|1|A|1260
8PNN|1|1|G|1261
8PNN|1|1|G|1262
8PNN|1|1|A|1263
8PNN|1|1|G|1264
8PNN|1|1|U|1265
8PNN|1|1|G|1266
8PNN|1|1|U|1267
8PNN|1|1|G|1268
8PNN|1|1|U|1269
8PNN|1|1|A|1270
8PNN|1|1|A|1271
8PNN|1|1|C|1272
8PNN|1|1|A|1273
8PNN|1|1|A|1274
8PNN|1|1|C|1275
8PNN|1|1|U|1276
8PNN|1|1|C|1277
8PNN|1|1|A|1278
8PNN|1|1|C|1279

Current chains

Chain 1

25S ribosomal RNA

Nearby chains