IL_8PNN_063
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAGGCCUGAUUUUAUGCAGGCCACCAU
- Length
- 40 nucleotides
- Bulged bases
- 8PNN|1|1|C|1556, 8PNN|1|1|A|1558, 8PNN|1|1|G|1573, 8PNN|1|1|C|1581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PNN|1|1|A|1537
8PNN|1|1|G|1538
8PNN|1|1|A|1539
8PNN|1|1|U|1540
8PNN|1|1|G|1541
8PNN|1|1|G|1542
*
8PNN|1|1|C|1551
8PNN|1|1|G|1552
8PNN|1|1|U|1553
8PNN|1|1|U|1554
8PNN|1|1|U|1555
8PNN|1|1|C|1556
8PNN|1|1|A|1557
8PNN|1|1|A|1558
8PNN|1|1|A|1559
8PNN|1|1|G|1560
8PNN|1|1|G|1561
8PNN|1|1|C|1562
8PNN|1|1|C|1563
8PNN|1|1|U|1564
8PNN|1|1|G|1565
8PNN|1|1|A|1566
8PNN|1|1|U|1567
8PNN|1|1|U|1568
8PNN|1|1|U|1569
8PNN|1|1|U|1570
8PNN|1|1|A|1571
8PNN|1|1|U|1572
8PNN|1|1|G|1573
8PNN|1|1|C|1574
8PNN|1|1|A|1575
8PNN|1|1|G|1576
8PNN|1|1|G|1577
8PNN|1|1|C|1578
8PNN|1|1|C|1579
8PNN|1|1|A|1580
8PNN|1|1|C|1581
8PNN|1|1|C|1582
8PNN|1|1|A|1583
8PNN|1|1|U|1584
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain 8
- 60S ribosomal protein L25
- Chain AK
- 60S ribosomal protein L37-A
- Chain j
- 60S ribosomal protein L2-A
- Chain p
- 60S ribosomal protein L8-A
- Chain v
- 60S ribosomal protein L15-A
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