IL_8PNN_152
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 8PNN|1|A|U|66, 8PNN|1|A|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PNN_152 not in the Motif Atlas
- Homologous match to IL_8CRE_396
- Geometric discrepancy: 0.1937
- The information below is about IL_8CRE_396
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.2
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8PNN|1|A|U|64
8PNN|1|A|A|65
8PNN|1|A|U|66
8PNN|1|A|A|67
8PNN|1|A|A|68
8PNN|1|A|G|69
*
8PNN|1|A|U|82
8PNN|1|A|G|83
8PNN|1|A|A|84
8PNN|1|A|A|85
8PNN|1|A|A|86
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain H
- 40S ribosomal protein S6-A
- Chain Z
- 40S ribosomal protein S24-A
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