IL_8PNN_355
3D structure
- PDB id
- 8PNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Bromolissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GAU*AC
- Length
- 5 nucleotides
- Bulged bases
- 8PNN|1|AR|A|3178
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8PNN_355 not in the Motif Atlas
- Homologous match to IL_8P9A_351
- Geometric discrepancy: 0.053
- The information below is about IL_8P9A_351
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
8PNN|1|AR|G|3177
8PNN|1|AR|A|3178
8PNN|1|AR|U|3179
*
8PNN|1|AR|A|3210
8PNN|1|AR|C|3211
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CH
- 60S ribosomal protein L6-A
- Chain CO
- 60S ribosomal protein L14-A
- Chain CQ
- 60S ribosomal protein L16-A
- Chain CU
- 60S ribosomal protein L20-A
- Chain DH
- 60S ribosomal protein L33-A
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