IL_8PNN_415

3D structure

PDB id

8PNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S yeast ribosome in complex with Bromolissoclimide

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUGGCC*GGAUUUCCAA

Length

16 nucleotides

Bulged bases

8PNN|1|sR|G|651, 8PNN|1|sR|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PNN|1|sR|U|649
8PNN|1|sR|U|650
8PNN|1|sR|G|651
8PNN|1|sR|G|652
8PNN|1|sR|C|653
8PNN|1|sR|C|654
*
8PNN|1|sR|G|676
8PNN|1|sR|G|677
8PNN|1|sR|A|678
8PNN|1|sR|U|679
8PNN|1|sR|U|680
8PNN|1|sR|U|681
8PNN|1|sR|C|682
8PNN|1|sR|C|683
8PNN|1|sR|A|684
8PNN|1|sR|A|685

Current chains

Chain sR

16S ribosomal RNA

Nearby chains

Chain d2

40S ribosomal protein S22-A

Chain s9

40S ribosomal protein S9-A