IL_8PV1_037

3D structure

PDB id

8PV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GACCUUC*GUAUC

Length

12 nucleotides

Bulged bases

8PV1|1|C1|A|1086

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PV1|1|C1|G|958
8PV1|1|C1|A|959
8PV1|1|C1|C|960
8PV1|1|C1|C|961
8PV1|1|C1|U|962
8PV1|1|C1|U|963
8PV1|1|C1|C|964
*
8PV1|1|C1|G|1084
8PV1|1|C1|U|1085
8PV1|1|C1|A|1086
8PV1|1|C1|U|1087
8PV1|1|C1|C|1088

Current chains

Chain C1

26S rRNA

Nearby chains

Chain LF

60S ribosomal protein l7-like protein

Chain LQ

Ribosomal protein L18-like protein