IL_8PV2_021

3D structure

PDB id

8PV2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

AUCAUC*GUGCACU

Length

13 nucleotides

Bulged bases

8PV2|1|C1|U|447, 8PV2|1|C1|C|471

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PV2|1|C1|A|446
8PV2|1|C1|U|447
8PV2|1|C1|C|448
8PV2|1|C1|A|449
8PV2|1|C1|U|450
8PV2|1|C1|C|451
*
8PV2|1|C1|G|466
8PV2|1|C1|U|467
8PV2|1|C1|G|468
8PV2|1|C1|C|469
8PV2|1|C1|A|470
8PV2|1|C1|C|471
8PV2|1|C1|U|472

Current chains

Chain C1

26S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein l7-like protein

Chain Lq

Putative 60S ribosomal protein