IL_8PV6_037

3D structure

PDB id

8PV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum pre-60S State 3 - post-5S rotation with Rix1 complex with Foot - composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

GACCUUC*GUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PV6|1|C1|G|958
8PV6|1|C1|A|959
8PV6|1|C1|C|960
8PV6|1|C1|C|961
8PV6|1|C1|U|962
8PV6|1|C1|U|963
8PV6|1|C1|C|964
*
8PV6|1|C1|G|1084
8PV6|1|C1|U|1085
8PV6|1|C1|C|1088

Current chains

Chain C1

26S rRNA

Nearby chains

Chain LF

60S ribosomal protein l7-like protein

Chain LQ

Ribosomal protein L18-like protein

Chain Lb

60S ribosomal protein L29