IL_8PVK_129
3D structure
- PDB id
- 8PVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- UAAGAAUAG*CUCGUA
- Length
- 15 nucleotides
- Bulged bases
- 8PVK|1|C1|A|3134, 8PVK|1|C1|A|3140
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PVK|1|C1|U|3133
8PVK|1|C1|A|3134
8PVK|1|C1|A|3135
8PVK|1|C1|G|3136
8PVK|1|C1|A|3137
8PVK|1|C1|A|3138
8PVK|1|C1|U|3139
8PVK|1|C1|A|3140
8PVK|1|C1|G|3141
*
8PVK|1|C1|C|3150
8PVK|1|C1|U|3151
8PVK|1|C1|C|3152
8PVK|1|C1|G|3153
8PVK|1|C1|U|3154
8PVK|1|C1|A|3155
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L6
- Chain LH
- 60S ribosomal protein l9-like protein
- Chain LM
- 60S ribosomal protein L14-like protein
- Chain LO
- 60S ribosomal protein L16-like protein
- Chain LS
- 60S ribosomal protein L20
Coloring options: