IL_8PVL_072

3D structure

PDB id

8PVL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CUAUCA*UUUAAUG

Length

13 nucleotides

Bulged bases

8PVL|1|C1|U|1722

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PVL|1|C1|C|1682
8PVL|1|C1|U|1683
8PVL|1|C1|A|1684
8PVL|1|C1|U|1685
8PVL|1|C1|C|1686
8PVL|1|C1|A|1687
*
8PVL|1|C1|U|1717
8PVL|1|C1|U|1718
8PVL|1|C1|U|1719
8PVL|1|C1|A|1720
8PVL|1|C1|A|1721
8PVL|1|C1|U|1722
8PVL|1|C1|G|1723

Current chains

Chain C1

26S rRNA

Nearby chains

Chain Ce

Ribosome biogenesis protein NOP53

Chain Lg

Ribosomal protein l34-like protein

Chain Lp

60S ribosomal protein L43-like protein