IL_8Q4F_027
3D structure
- PDB id
- 8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of arbekacin bound Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGCCAG*CGGUAAUACG
- Length
- 17 nucleotides
- Bulged bases
- 8Q4F|1|A|A|532, 8Q4F|1|A|U|534, 8Q4F|1|A|A|535
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Q4F|1|A|C|514
8Q4F|1|A|G|515
8Q4F|1|A|G|517
8Q4F|1|A|C|518
8Q4F|1|A|C|519
8Q4F|1|A|A|520
8Q4F|1|A|G|521
*
8Q4F|1|A|C|528
8Q4F|1|A|G|529
8Q4F|1|A|G|530
8Q4F|1|A|U|531
8Q4F|1|A|A|532
8Q4F|1|A|A|533
8Q4F|1|A|U|534
8Q4F|1|A|A|535
8Q4F|1|A|C|536
8Q4F|1|A|G|537
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain L
- Small ribosomal subunit protein uS12
Coloring options: