IL_8Q4F_051

3D structure

PDB id

8Q4F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8Q4F_051 not in the Motif Atlas

Geometric match to IL_6FZ0_001

Geometric discrepancy: 0.3788

The information below is about IL_6FZ0_001

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

8Q4F|1|A|C|998
8Q4F|1|A|C|999
*
8Q4F|1|A|G|1041
8Q4F|1|A|A|1042
8Q4F|1|A|G|1043

Current chains

Chain A

16S rRNA

Nearby chains