IL_8Q4F_060

3D structure

PDB id

8Q4F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUUGCCAGCGG*CGGGAACUC

Length

20 nucleotides

Bulged bases

8Q4F|1|A|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Q4F|1|A|G|1124
8Q4F|1|A|U|1125
8Q4F|1|A|U|1126
8Q4F|1|A|G|1127
8Q4F|1|A|C|1128
8Q4F|1|A|C|1129
8Q4F|1|A|A|1130
8Q4F|1|A|G|1131
8Q4F|1|A|C|1132
8Q4F|1|A|G|1133
8Q4F|1|A|G|1134
*
8Q4F|1|A|C|1141
8Q4F|1|A|G|1142
8Q4F|1|A|G|1143
8Q4F|1|A|G|1144
8Q4F|1|A|A|1145
8Q4F|1|A|A|1146
8Q4F|1|A|C|1147
8Q4F|1|A|U|1148
8Q4F|1|A|C|1149

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

Small ribosomal subunit protein uS9

Chain J

Small ribosomal subunit protein uS10