3D structure

PDB id
8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of arbekacin bound Escherichia coli 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GUUGCCAGCGG*CGGGAACUC
Length
20 nucleotides
Bulged bases
8Q4F|1|A|U|1126
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8Q4F|1|A|G|1124
8Q4F|1|A|U|1125
8Q4F|1|A|U|1126
8Q4F|1|A|G|1127
8Q4F|1|A|C|1128
8Q4F|1|A|C|1129
8Q4F|1|A|A|1130
8Q4F|1|A|G|1131
8Q4F|1|A|C|1132
8Q4F|1|A|G|1133
8Q4F|1|A|G|1134
*
8Q4F|1|A|C|1141
8Q4F|1|A|G|1142
8Q4F|1|A|G|1143
8Q4F|1|A|G|1144
8Q4F|1|A|A|1145
8Q4F|1|A|A|1146
8Q4F|1|A|C|1147
8Q4F|1|A|U|1148
8Q4F|1|A|C|1149

Current chains

Chain A
16S rRNA

Nearby chains

Chain I
Small ribosomal subunit protein uS9
Chain J
Small ribosomal subunit protein uS10

Coloring options:

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