IL_8Q4F_121

3D structure

PDB id

8Q4F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

8Q4F|1|a|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Q4F|1|a|C|1043
8Q4F|1|a|C|1044
8Q4F|1|a|C|1045
8Q4F|1|a|A|1046
8Q4F|1|a|G|1047
8Q4F|1|a|A|1048
8Q4F|1|a|C|1049
8Q4F|1|a|A|1050
8Q4F|1|a|G|1051
8Q4F|1|a|C|1052
*
8Q4F|1|a|G|1107
8Q4F|1|a|U|1108
8Q4F|1|a|C|1109
8Q4F|1|a|G|1110
8Q4F|1|a|A|1111
8Q4F|1|a|G|1112

Current chains

Chain a

23S rRNA

Nearby chains

Chain 3

Large ribosomal subunit protein bL36A

Chain g

Large ribosomal subunit protein uL6