IL_8Q4F_138

3D structure

PDB id

8Q4F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUG*CAAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8Q4F_138 not in the Motif Atlas

Homologous match to IL_4WF9_060

Geometric discrepancy: 0.5272

The information below is about IL_4WF9_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Q4F|1|a|C|1480
8Q4F|1|a|U|1481
8Q4F|1|a|G|1482
*
8Q4F|1|a|C|1507
8Q4F|1|a|A|1508
8Q4F|1|a|A|1509
8Q4F|1|a|G|1510
8Q4F|1|a|G|1511

Current chains

Chain a

23S rRNA

Nearby chains