IL_8Q4F_183
3D structure
- PDB id
- 8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of arbekacin bound Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUG*CAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: GUG,CAC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q4F_183 not in the Motif Atlas
- Geometric match to IL_4WF9_034
- Geometric discrepancy: 0.229
- The information below is about IL_4WF9_034
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
8Q4F|1|a|G|2742
8Q4F|1|a|U|2743
8Q4F|1|a|G|2744
*
8Q4F|1|a|C|2760
8Q4F|1|a|A|2761
8Q4F|1|a|C|2762
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36A
- Chain g
- Large ribosomal subunit protein uL6
Coloring options: