IL_8Q4F_200

3D structure

PDB id

8Q4F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUGAAGAAGGCC*GUUGUAAAGUA

Length

24 nucleotides

Bulged bases

8Q4F|1|A|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Q4F|1|A|U|407
8Q4F|1|A|A|408
8Q4F|1|A|U|409
8Q4F|1|A|G|410
8Q4F|1|A|A|411
8Q4F|1|A|A|412
8Q4F|1|A|G|413
8Q4F|1|A|A|414
8Q4F|1|A|A|415
8Q4F|1|A|G|416
8Q4F|1|A|G|417
8Q4F|1|A|C|418
8Q4F|1|A|C|419
*
8Q4F|1|A|G|425
8Q4F|1|A|U|426
8Q4F|1|A|U|427
8Q4F|1|A|G|428
8Q4F|1|A|U|429
8Q4F|1|A|A|430
8Q4F|1|A|A|431
8Q4F|1|A|A|432
8Q4F|1|A|G|433
8Q4F|1|A|U|434
8Q4F|1|A|A|435

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

Small ribosomal subunit protein uS4