IL_8Q4F_205

3D structure

PDB id

8Q4F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of arbekacin bound Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGUUU*GAAUGUGCCUUCGGGAAC

Length

25 nucleotides

Bulged bases

8Q4F|1|A|U|1030, 8Q4F|1|A|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Q4F|1|A|G|1003
8Q4F|1|A|A|1004
8Q4F|1|A|A|1005
8Q4F|1|A|G|1006
8Q4F|1|A|U|1007
8Q4F|1|A|U|1008
8Q4F|1|A|U|1009
*
8Q4F|1|A|G|1020
8Q4F|1|A|A|1021
8Q4F|1|A|A|1022
8Q4F|1|A|U|1023
8Q4F|1|A|G|1024
8Q4F|1|A|U|1025
8Q4F|1|A|G|1026
8Q4F|1|A|C|1027
8Q4F|1|A|C|1028
8Q4F|1|A|U|1029
8Q4F|1|A|U|1030
8Q4F|1|A|C|1031
8Q4F|1|A|G|1032
8Q4F|1|A|G|1033
8Q4F|1|A|G|1034
8Q4F|1|A|A|1035
8Q4F|1|A|A|1036
8Q4F|1|A|C|1037

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14