3D structure

PDB id
8Q4F (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of arbekacin bound Escherichia coli 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
AAUUCAUC*GAAUGUUAU
Length
17 nucleotides
Bulged bases
8Q4F|1|a|U|931
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8Q4F|1|a|A|844
8Q4F|1|a|A|845
8Q4F|1|a|U|846
8Q4F|1|a|U|847
8Q4F|1|a|C|848
8Q4F|1|a|A|849
8Q4F|1|a|U|850
8Q4F|1|a|C|851
*
8Q4F|1|a|G|926
8Q4F|1|a|A|927
8Q4F|1|a|A|928
8Q4F|1|a|U|929
8Q4F|1|a|G|930
8Q4F|1|a|U|931
8Q4F|1|a|U|932
8Q4F|1|a|A|933
8Q4F|1|a|U|934

Current chains

Chain a
23S rRNA

Nearby chains

Chain y
Large ribosomal subunit protein uL30

Coloring options:

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