IL_8Q5I_014
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- GAG*CC
- Length
- 5 nucleotides
- Bulged bases
- 8Q5I|1|1|A|506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_014 not in the Motif Atlas
- Homologous match to IL_8C3A_019
- Geometric discrepancy: 0.0883
- The information below is about IL_8C3A_019
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8Q5I|1|1|G|505
8Q5I|1|1|A|506
8Q5I|1|1|G|507
*
8Q5I|1|1|C|578
8Q5I|1|1|C|579
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AG
- 60S ribosomal protein L33-A
- Chain l
- 60S ribosomal protein L4-B
- Chain n
- 60S ribosomal protein L6
- Chain u
- 60S ribosomal protein L14-B
Coloring options: