IL_8Q5I_048
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- AUG*CU
- Length
- 5 nucleotides
- Bulged bases
- 8Q5I|1|1|U|1177
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_048 not in the Motif Atlas
- Geometric match to IL_7RQB_038
- Geometric discrepancy: 0.1023
- The information below is about IL_7RQB_038
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.16
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 116
Unit IDs
8Q5I|1|1|A|1176
8Q5I|1|1|U|1177
8Q5I|1|1|G|1178
*
8Q5I|1|1|C|1320
8Q5I|1|1|U|1321
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AG
- 60S ribosomal protein L33-A
- Chain o
- 60S ribosomal protein L7-A
- Chain u
- 60S ribosomal protein L14-B
- Chain w
- Ribosomal protein L13
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