IL_8Q5I_059
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- GUCAAC*GGAC
- Length
- 10 nucleotides
- Bulged bases
- 8Q5I|1|1|G|1510
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_059 not in the Motif Atlas
- Homologous match to IL_8C3A_066
- Geometric discrepancy: 0.0704
- The information below is about IL_8C3A_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
8Q5I|1|1|G|1496
8Q5I|1|1|U|1497
8Q5I|1|1|C|1498
8Q5I|1|1|A|1499
8Q5I|1|1|A|1500
8Q5I|1|1|C|1501
*
8Q5I|1|1|G|1509
8Q5I|1|1|G|1510
8Q5I|1|1|A|1511
8Q5I|1|1|C|1512
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AM
- 60S ribosomal protein L39
- Chain x
- Ribosomal protein L22
- Chain z
- 60S ribosomal protein L19-A
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