IL_8Q5I_092
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 8Q5I|1|1|G|2578
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_092 not in the Motif Atlas
- Homologous match to IL_8C3A_100
- Geometric discrepancy: 0.066
- The information below is about IL_8C3A_100
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.10
- Basepair signature
- cWW-cWW-cWW-tHS
- Number of instances in this motif group
- 9
Unit IDs
8Q5I|1|1|U|2401
8Q5I|1|1|A|2402
8Q5I|1|1|G|2403
*
8Q5I|1|1|U|2576
8Q5I|1|1|G|2577
8Q5I|1|1|G|2578
8Q5I|1|1|G|2579
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 10
- Mixture of endogenous E-tRNAs
- Chain AP
- 60S ribosomal protein L42-B
- Chain j
- 60S ribosomal protein L2-B
- Chain v
- 60S ribosomal protein L15-A
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