IL_8Q5I_103
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- U(OMC)AAG*CGACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_103 not in the Motif Atlas
- Homologous match to IL_8C3A_114
- Geometric discrepancy: 0.0749
- The information below is about IL_8C3A_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65585.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
8Q5I|1|1|U|2807
8Q5I|1|1|OMC|2808
8Q5I|1|1|A|2809
8Q5I|1|1|A|2810
8Q5I|1|1|G|2811
*
8Q5I|1|1|C|2821
8Q5I|1|1|G|2822
8Q5I|1|1|A|2823
8Q5I|1|1|C|2824
8Q5I|1|1|A|2825
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AN
- 60S ribosomal protein L40-B
- Chain r
- 60S ribosomal protein L10
Coloring options: