IL_8Q5I_122
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CAACG*UUG
- Length
- 8 nucleotides
- Bulged bases
- 8Q5I|1|1|U|3224
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_122 not in the Motif Atlas
- Homologous match to IL_8C3A_133
- Geometric discrepancy: 0.0605
- The information below is about IL_8C3A_133
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60154.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
8Q5I|1|1|C|3190
8Q5I|1|1|A|3191
8Q5I|1|1|A|3192
8Q5I|1|1|C|3193
8Q5I|1|1|G|3194
*
8Q5I|1|1|U|3223
8Q5I|1|1|U|3224
8Q5I|1|1|G|3225
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AG
- 60S ribosomal protein L33-A
- Chain n
- 60S ribosomal protein L6
- Chain u
- 60S ribosomal protein L14-B
- Chain w
- Ribosomal protein L13
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